Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.26■□□□□ 0.35
Pja1O55176 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pja1O55176 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pja1O55176 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pja1O55176 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Pja1O55176 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.25■□□□□ 0.35
Pja1O55176 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Pja1O55176 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Pja1O55176 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pja1O55176 Gm27463-201ENSMUST00000183569 57 ntBASIC17.25■□□□□ 0.35
Pja1O55176 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pja1O55176 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pja1O55176 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pja1O55176 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Pja1O55176 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pja1O55176 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pja1O55176 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pja1O55176 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pja1O55176 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.24■□□□□ 0.35
Pja1O55176 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.24■□□□□ 0.35
Pja1O55176 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.24■□□□□ 0.35
Pja1O55176 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.24■□□□□ 0.35
Pja1O55176 Gm36967-201ENSMUST00000193814 266 ntBASIC17.24■□□□□ 0.35
Pja1O55176 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pja1O55176 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pja1O55176 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Pja1O55176 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.24■□□□□ 0.35
Pja1O55176 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pja1O55176 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pja1O55176 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pja1O55176 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pja1O55176 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pja1O55176 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Gm29257-201ENSMUST00000186115 639 ntBASIC17.23■□□□□ 0.35
Pja1O55176 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.23■□□□□ 0.35
Pja1O55176 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.23■□□□□ 0.35
Pja1O55176 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pja1O55176 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pja1O55176 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
Pja1O55176 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms