Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.94■□□□□ 0.46
Trdmt1O55055 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.94■□□□□ 0.46
Trdmt1O55055 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.94■□□□□ 0.46
Trdmt1O55055 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.94■□□□□ 0.46
Trdmt1O55055 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trdmt1O55055 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdmt1O55055 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trdmt1O55055 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trdmt1O55055 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.93■□□□□ 0.46
Trdmt1O55055 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Gm6736-201ENSMUST00000166583 948 ntBASIC17.93■□□□□ 0.46
Trdmt1O55055 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trdmt1O55055 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Gm43575-201ENSMUST00000196420 516 ntBASIC17.93■□□□□ 0.46
Trdmt1O55055 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.93■□□□□ 0.46
Trdmt1O55055 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.93■□□□□ 0.46
Trdmt1O55055 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trdmt1O55055 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trdmt1O55055 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.93■□□□□ 0.46
Trdmt1O55055 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trdmt1O55055 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Gm4995-201ENSMUST00000117247 432 ntBASIC17.92■□□□□ 0.46
Trdmt1O55055 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Gm2756-201ENSMUST00000195851 400 ntBASIC17.92■□□□□ 0.46
Trdmt1O55055 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trdmt1O55055 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trdmt1O55055 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdmt1O55055 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.91■□□□□ 0.46
Trdmt1O55055 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Trdmt1O55055 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.91■□□□□ 0.46
Trdmt1O55055 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.91■□□□□ 0.46
Trdmt1O55055 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.91■□□□□ 0.46
Trdmt1O55055 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.91■□□□□ 0.46
Trdmt1O55055 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.91■□□□□ 0.46
Trdmt1O55055 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.91■□□□□ 0.46
Trdmt1O55055 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.91■□□□□ 0.46
Trdmt1O55055 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.91■□□□□ 0.46
Trdmt1O55055 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trdmt1O55055 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms