Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1bO55017 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1bO55017 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1bO55017 Gm25406-201ENSMUST00000157599 105 ntBASIC15.72■□□□□ 0.11
Cacna1bO55017 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1bO55017 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cacna1bO55017 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1bO55017 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1bO55017 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1bO55017 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cacna1bO55017 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.71■□□□□ 0.11
Cacna1bO55017 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Cacna1bO55017 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.71■□□□□ 0.11
Cacna1bO55017 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.71■□□□□ 0.11
Cacna1bO55017 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.71■□□□□ 0.11
Cacna1bO55017 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1bO55017 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.71■□□□□ 0.11
Cacna1bO55017 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cacna1bO55017 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1bO55017 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Cacna1bO55017 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.71■□□□□ 0.1
Cacna1bO55017 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.71■□□□□ 0.1
Cacna1bO55017 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1bO55017 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1bO55017 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1bO55017 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cacna1bO55017 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.71■□□□□ 0.1
Cacna1bO55017 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Cacna1bO55017 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.7■□□□□ 0.1
Cacna1bO55017 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cacna1bO55017 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Cacna1bO55017 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
Cacna1bO55017 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cacna1bO55017 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.7■□□□□ 0.1
Cacna1bO55017 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.7■□□□□ 0.1
Cacna1bO55017 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1bO55017 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Gm14057-201ENSMUST00000120631 482 ntBASIC15.69■□□□□ 0.1
Cacna1bO55017 Gm11780-201ENSMUST00000136880 516 ntBASIC15.69■□□□□ 0.1
Cacna1bO55017 Gm5682-201ENSMUST00000173402 505 ntBASIC15.69■□□□□ 0.1
Cacna1bO55017 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1bO55017 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1bO55017 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1bO55017 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.69■□□□□ 0.1
Cacna1bO55017 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1bO55017 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1bO55017 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1bO55017 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cacna1bO55017 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1bO55017 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.68■□□□□ 0.1
Cacna1bO55017 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cacna1bO55017 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1bO55017 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1bO55017 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.68■□□□□ 0.1
Cacna1bO55017 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cacna1bO55017 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.68■□□□□ 0.1
Cacna1bO55017 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms