Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Gm15693-201ENSMUST00000120470 637 ntBASIC21.03■□□□□ 0.96
Cntnap1O54991 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC21.03■□□□□ 0.96
Cntnap1O54991 AC135669.1-201ENSMUST00000213585 412 ntBASIC21.03■□□□□ 0.96
Cntnap1O54991 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC21.03■□□□□ 0.96
Cntnap1O54991 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cntnap1O54991 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cntnap1O54991 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap1O54991 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.02■□□□□ 0.96
Cntnap1O54991 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 AC151836.1-202ENSMUST00000226259 753 ntBASIC21.02■□□□□ 0.96
Cntnap1O54991 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap1O54991 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.02■□□□□ 0.95
Cntnap1O54991 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cntnap1O54991 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.01■□□□□ 0.95
Cntnap1O54991 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC21.01■□□□□ 0.95
Cntnap1O54991 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC21.01■□□□□ 0.95
Cntnap1O54991 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Cntnap1O54991 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cntnap1O54991 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC21.01■□□□□ 0.95
Cntnap1O54991 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 AC131710.1-201ENSMUST00000228336 990 ntBASIC21.01■□□□□ 0.95
Cntnap1O54991 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap1O54991 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cntnap1O54991 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21■□□□□ 0.95
Cntnap1O54991 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC21■□□□□ 0.95
Cntnap1O54991 Mir7085-201ENSMUST00000184353 66 ntBASIC21■□□□□ 0.95
Cntnap1O54991 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC21■□□□□ 0.95
Cntnap1O54991 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap1O54991 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cntnap1O54991 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap1O54991 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap1O54991 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Gm38319-201ENSMUST00000194537 1266 ntBASIC20.99■□□□□ 0.95
Cntnap1O54991 Gm18057-201ENSMUST00000208220 503 ntBASIC20.99■□□□□ 0.95
Cntnap1O54991 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Grk6-206ENSMUST00000224995 2971 ntBASIC20.99■□□□□ 0.95
Cntnap1O54991 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap1O54991 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap1O54991 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.99■□□□□ 0.95
Cntnap1O54991 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap1O54991 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap1O54991 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap1O54991 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cntnap1O54991 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.98■□□□□ 0.95
Cntnap1O54991 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cntnap1O54991 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap1O54991 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cntnap1O54991 Mir6420-201ENSMUST00000185032 102 ntBASIC20.97■□□□□ 0.95
Cntnap1O54991 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms