Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ChkaO54804 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.52■□□□□ 0.23
ChkaO54804 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.52■□□□□ 0.23
ChkaO54804 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ChkaO54804 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.51■□□□□ 0.23
ChkaO54804 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.51■□□□□ 0.23
ChkaO54804 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.51■□□□□ 0.23
ChkaO54804 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ChkaO54804 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.5■□□□□ 0.23
ChkaO54804 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.5■□□□□ 0.23
ChkaO54804 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
ChkaO54804 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ChkaO54804 Gm15565-201ENSMUST00000118890 427 ntBASIC16.5■□□□□ 0.23
ChkaO54804 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.5■□□□□ 0.23
ChkaO54804 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.5■□□□□ 0.23
ChkaO54804 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ChkaO54804 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ChkaO54804 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ChkaO54804 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Gm13559-201ENSMUST00000120476 863 ntBASIC16.49■□□□□ 0.23
ChkaO54804 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ChkaO54804 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.49■□□□□ 0.23
ChkaO54804 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ChkaO54804 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ChkaO54804 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.49■□□□□ 0.23
ChkaO54804 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
ChkaO54804 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ChkaO54804 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.48■□□□□ 0.23
ChkaO54804 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ChkaO54804 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Gm13474-201ENSMUST00000122466 815 ntBASIC16.48■□□□□ 0.23
ChkaO54804 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.48■□□□□ 0.23
ChkaO54804 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms