Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DffbO54788 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DffbO54788 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
DffbO54788 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DffbO54788 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
DffbO54788 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.05□□□□□ -0.16
DffbO54788 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DffbO54788 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.05□□□□□ -0.16
DffbO54788 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.04□□□□□ -0.16
DffbO54788 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
DffbO54788 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
DffbO54788 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.04□□□□□ -0.16
DffbO54788 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.04□□□□□ -0.16
DffbO54788 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
DffbO54788 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffbO54788 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.03□□□□□ -0.16
DffbO54788 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
DffbO54788 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.03□□□□□ -0.16
DffbO54788 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.03□□□□□ -0.16
DffbO54788 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
DffbO54788 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Gm7791-201ENSMUST00000219066 539 ntBASIC14.03□□□□□ -0.16
DffbO54788 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.03□□□□□ -0.16
DffbO54788 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
DffbO54788 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.03□□□□□ -0.16
DffbO54788 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.03□□□□□ -0.16
DffbO54788 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
DffbO54788 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DffbO54788 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
DffbO54788 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
DffbO54788 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
DffbO54788 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.02□□□□□ -0.16
DffbO54788 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.02□□□□□ -0.16
DffbO54788 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DffbO54788 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Mir1199-201ENSMUST00000117015 119 ntBASIC14.02□□□□□ -0.17
DffbO54788 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
DffbO54788 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.02□□□□□ -0.17
DffbO54788 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DffbO54788 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DffbO54788 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
DffbO54788 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DffbO54788 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
DffbO54788 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.02□□□□□ -0.17
DffbO54788 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms