Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.39■□□□□ 0.54
Stx1aO35526 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Stx1aO35526 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stx1aO35526 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Stx1aO35526 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Stx1aO35526 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Stx1aO35526 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.39■□□□□ 0.53
Stx1aO35526 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Stx1aO35526 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.39■□□□□ 0.53
Stx1aO35526 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stx1aO35526 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.39■□□□□ 0.53
Stx1aO35526 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stx1aO35526 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.39■□□□□ 0.53
Stx1aO35526 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Stx1aO35526 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stx1aO35526 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stx1aO35526 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Stx1aO35526 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.38■□□□□ 0.53
Stx1aO35526 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.38■□□□□ 0.53
Stx1aO35526 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.38■□□□□ 0.53
Stx1aO35526 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.38■□□□□ 0.53
Stx1aO35526 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Stx1aO35526 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.38■□□□□ 0.53
Stx1aO35526 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Stx1aO35526 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Stx1aO35526 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Stx1aO35526 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.37■□□□□ 0.53
Stx1aO35526 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Stx1aO35526 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Stx1aO35526 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.37■□□□□ 0.53
Stx1aO35526 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Stx1aO35526 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.37■□□□□ 0.53
Stx1aO35526 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Stx1aO35526 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Stx1aO35526 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.36■□□□□ 0.53
Stx1aO35526 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.36■□□□□ 0.53
Stx1aO35526 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.36■□□□□ 0.53
Stx1aO35526 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.36■□□□□ 0.53
Stx1aO35526 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Stx1aO35526 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Stx1aO35526 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Stx1aO35526 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stx1aO35526 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms