Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Col15a1O35206 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.87■□□□□ 0.93
Col15a1O35206 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.86■□□□□ 0.93
Col15a1O35206 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col15a1O35206 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col15a1O35206 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.86■□□□□ 0.93
Col15a1O35206 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
Col15a1O35206 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.86■□□□□ 0.93
Col15a1O35206 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col15a1O35206 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col15a1O35206 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col15a1O35206 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col15a1O35206 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col15a1O35206 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.86■□□□□ 0.93
Col15a1O35206 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.85■□□□□ 0.93
Col15a1O35206 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col15a1O35206 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.85■□□□□ 0.93
Col15a1O35206 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.85■□□□□ 0.93
Col15a1O35206 Gm4899-201ENSMUST00000178708 719 ntBASIC20.85■□□□□ 0.93
Col15a1O35206 Gm27300-201ENSMUST00000184085 97 ntBASIC20.85■□□□□ 0.93
Col15a1O35206 Gm27335-201ENSMUST00000184758 97 ntBASIC20.85■□□□□ 0.93
Col15a1O35206 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.85■□□□□ 0.93
Col15a1O35206 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.85■□□□□ 0.93
Col15a1O35206 Gm45167-201ENSMUST00000208007 322 ntBASIC20.85■□□□□ 0.93
Col15a1O35206 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Col15a1O35206 Chchd1-203ENSMUST00000224633 557 ntBASIC20.85■□□□□ 0.93
Col15a1O35206 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.85■□□□□ 0.93
Col15a1O35206 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col15a1O35206 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Col15a1O35206 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Col15a1O35206 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Col15a1O35206 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.84■□□□□ 0.93
Col15a1O35206 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Col15a1O35206 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.84■□□□□ 0.93
Col15a1O35206 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col15a1O35206 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col15a1O35206 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col15a1O35206 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col15a1O35206 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col15a1O35206 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Gm26308-201ENSMUST00000157768 69 ntBASIC20.83■□□□□ 0.92
Col15a1O35206 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.83■□□□□ 0.92
Col15a1O35206 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.83■□□□□ 0.92
Col15a1O35206 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col15a1O35206 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col15a1O35206 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Col15a1O35206 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Col15a1O35206 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.82■□□□□ 0.92
Col15a1O35206 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col15a1O35206 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Col15a1O35206 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col15a1O35206 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col15a1O35206 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms