Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Gfra3O35118 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.11□□□□□ -0.15
Gfra3O35118 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.11□□□□□ -0.15
Gfra3O35118 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.1□□□□□ -0.15
Gfra3O35118 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.1□□□□□ -0.15
Gfra3O35118 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.1□□□□□ -0.15
Gfra3O35118 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.1□□□□□ -0.15
Gfra3O35118 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Gfra3O35118 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gfra3O35118 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.1□□□□□ -0.15
Gfra3O35118 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfra3O35118 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gfra3O35118 Gm27741-201ENSMUST00000185060 237 ntBASIC14.09□□□□□ -0.15
Gfra3O35118 Gm44430-201ENSMUST00000203376 995 ntBASIC14.09□□□□□ -0.15
Gfra3O35118 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.09□□□□□ -0.15
Gfra3O35118 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gfra3O35118 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gfra3O35118 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gfra3O35118 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfra3O35118 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gfra3O35118 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gfra3O35118 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gfra3O35118 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Gfra3O35118 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.08□□□□□ -0.16
Gfra3O35118 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gfra3O35118 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gfra3O35118 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.08□□□□□ -0.16
Gfra3O35118 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Gfra3O35118 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.08□□□□□ -0.16
Gfra3O35118 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gfra3O35118 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfra3O35118 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gfra3O35118 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gfra3O35118 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.07□□□□□ -0.16
Gfra3O35118 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Gfra3O35118 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.07□□□□□ -0.16
Gfra3O35118 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.07□□□□□ -0.16
Gfra3O35118 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms