Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trove2O08848 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trove2O08848 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.79■□□□□ 0.28
Trove2O08848 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trove2O08848 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.79■□□□□ 0.28
Trove2O08848 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trove2O08848 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Trove2O08848 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trove2O08848 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trove2O08848 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trove2O08848 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trove2O08848 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.78■□□□□ 0.28
Trove2O08848 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Trove2O08848 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.78■□□□□ 0.28
Trove2O08848 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trove2O08848 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trove2O08848 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trove2O08848 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trove2O08848 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Trove2O08848 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trove2O08848 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trove2O08848 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.77■□□□□ 0.28
Trove2O08848 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trove2O08848 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Trove2O08848 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trove2O08848 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trove2O08848 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.76■□□□□ 0.27
Trove2O08848 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trove2O08848 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.76■□□□□ 0.27
Trove2O08848 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trove2O08848 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.76■□□□□ 0.27
Trove2O08848 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trove2O08848 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.75■□□□□ 0.27
Trove2O08848 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.75■□□□□ 0.27
Trove2O08848 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.75■□□□□ 0.27
Trove2O08848 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms