Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Dctn1O08788 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Dctn1O08788 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.1■□□□□ 0.81
Dctn1O08788 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.1■□□□□ 0.81
Dctn1O08788 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.1■□□□□ 0.81
Dctn1O08788 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Dctn1O08788 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.1■□□□□ 0.81
Dctn1O08788 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
Dctn1O08788 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Dctn1O08788 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.1■□□□□ 0.81
Dctn1O08788 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Dctn1O08788 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Gm15467-201ENSMUST00000120582 445 ntBASIC20.09■□□□□ 0.81
Dctn1O08788 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Dctn1O08788 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.09■□□□□ 0.81
Dctn1O08788 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.09■□□□□ 0.81
Dctn1O08788 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dctn1O08788 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.08■□□□□ 0.81
Dctn1O08788 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dctn1O08788 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dctn1O08788 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Dctn1O08788 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
Dctn1O08788 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Dctn1O08788 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.08■□□□□ 0.81
Dctn1O08788 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.08■□□□□ 0.81
Dctn1O08788 Gm12497-201ENSMUST00000138778 237 ntBASIC20.08■□□□□ 0.81
Dctn1O08788 Gm6550-201ENSMUST00000187574 993 ntBASIC20.08■□□□□ 0.81
Dctn1O08788 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Dctn1O08788 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Dctn1O08788 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dctn1O08788 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dctn1O08788 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dctn1O08788 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dctn1O08788 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Dctn1O08788 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.07■□□□□ 0.8
Dctn1O08788 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dctn1O08788 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dctn1O08788 Gm36967-201ENSMUST00000193814 266 ntBASIC20.07■□□□□ 0.8
Dctn1O08788 Gm2213-201ENSMUST00000197485 688 ntBASIC20.07■□□□□ 0.8
Dctn1O08788 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dctn1O08788 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dctn1O08788 AV026068-213ENSMUST00000223675 1171 ntBASIC20.07■□□□□ 0.8
Dctn1O08788 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.07■□□□□ 0.8
Dctn1O08788 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dctn1O08788 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Dctn1O08788 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dctn1O08788 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.07■□□□□ 0.8
Dctn1O08788 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dctn1O08788 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Gm12260-201ENSMUST00000122447 411 ntBASIC20.06■□□□□ 0.8
Dctn1O08788 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.06■□□□□ 0.8
Dctn1O08788 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Gm27628-201ENSMUST00000184911 107 ntBASIC20.06■□□□□ 0.8
Dctn1O08788 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.06■□□□□ 0.8
Dctn1O08788 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Dctn1O08788 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.06■□□□□ 0.8
Dctn1O08788 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dctn1O08788 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms