Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Ube3aO08759 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ube3aO08759 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3aO08759 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.69■□□□□ 0.42
Ube3aO08759 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ube3aO08759 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ube3aO08759 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.68■□□□□ 0.42
Ube3aO08759 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ube3aO08759 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Ube3aO08759 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.67■□□□□ 0.42
Ube3aO08759 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ube3aO08759 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ube3aO08759 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ube3aO08759 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ube3aO08759 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ube3aO08759 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ube3aO08759 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.66■□□□□ 0.42
Ube3aO08759 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.66■□□□□ 0.42
Ube3aO08759 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.66■□□□□ 0.42
Ube3aO08759 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ube3aO08759 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ube3aO08759 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube3aO08759 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Ube3aO08759 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube3aO08759 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube3aO08759 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ube3aO08759 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.65■□□□□ 0.42
Ube3aO08759 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ube3aO08759 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ube3aO08759 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ube3aO08759 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.65■□□□□ 0.42
Ube3aO08759 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube3aO08759 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms