Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf11bO08712 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf11bO08712 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf11bO08712 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf11bO08712 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf11bO08712 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Gm11336-201ENSMUST00000118168 334 ntBASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tnfrsf11bO08712 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Gm13559-201ENSMUST00000120476 863 ntBASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf11bO08712 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf11bO08712 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf11bO08712 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Gm36967-201ENSMUST00000193814 266 ntBASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Gm29707-201ENSMUST00000196325 491 ntBASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf11bO08712 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms