Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3yl1O08641 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.59■□□□□ 0.09
Sh3yl1O08641 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3yl1O08641 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3yl1O08641 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3yl1O08641 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3yl1O08641 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3yl1O08641 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3yl1O08641 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3yl1O08641 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.58■□□□□ 0.08
Sh3yl1O08641 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3yl1O08641 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Phf7-203ENSMUST00000226565 1971 ntBASIC15.57■□□□□ 0.08
Sh3yl1O08641 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Gm11355-201ENSMUST00000121120 306 ntBASIC15.57■□□□□ 0.08
Sh3yl1O08641 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3yl1O08641 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3yl1O08641 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.55■□□□□ 0.08
Sh3yl1O08641 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3yl1O08641 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms