Protein–RNA interactions for Protein: E0CZH3

Foxi3, Forkhead box I3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxi3E0CZH3 Mir2861-201ENSMUST00000175539 82 ntBASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Foxi3E0CZH3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Foxi3E0CZH3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Gm11643-201ENSMUST00000119578 864 ntBASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxi3E0CZH3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Mir6349-201ENSMUST00000184059 97 ntBASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Gm26524-201ENSMUST00000192339 390 ntBASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxi3E0CZH3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms