Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Syce3B5KM66 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.77■□□□□ 0.6
Syce3B5KM66 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Syce3B5KM66 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Syce3B5KM66 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Syce3B5KM66 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Syce3B5KM66 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Syce3B5KM66 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.76■□□□□ 0.59
Syce3B5KM66 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.76■□□□□ 0.59
Syce3B5KM66 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Syce3B5KM66 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Syce3B5KM66 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Syce3B5KM66 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Syce3B5KM66 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Syce3B5KM66 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Syce3B5KM66 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.75■□□□□ 0.59
Syce3B5KM66 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.75■□□□□ 0.59
Syce3B5KM66 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.75■□□□□ 0.59
Syce3B5KM66 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syce3B5KM66 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.75■□□□□ 0.59
Syce3B5KM66 Asic1-205ENSMUST00000228185 1818 ntBASIC18.74■□□□□ 0.59
Syce3B5KM66 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Syce3B5KM66 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Syce3B5KM66 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.74■□□□□ 0.59
Syce3B5KM66 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syce3B5KM66 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.73■□□□□ 0.59
Syce3B5KM66 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Syce3B5KM66 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Syce3B5KM66 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.73■□□□□ 0.59
Syce3B5KM66 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syce3B5KM66 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.72■□□□□ 0.59
Syce3B5KM66 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms