Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a5A6H584 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col6a5A6H584 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.29□□□□□ -0.44
Col6a5A6H584 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Gm14719-201ENSMUST00000121891 340 ntBASIC12.28□□□□□ -0.44
Col6a5A6H584 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a5A6H584 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.28□□□□□ -0.44
Col6a5A6H584 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Mir7085-201ENSMUST00000184353 66 ntBASIC12.28□□□□□ -0.44
Col6a5A6H584 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col6a5A6H584 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.28□□□□□ -0.44
Col6a5A6H584 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.28□□□□□ -0.44
Col6a5A6H584 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a5A6H584 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a5A6H584 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm22065-201ENSMUST00000103753 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm22066-201ENSMUST00000103761 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24932-201ENSMUST00000103763 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24115-201ENSMUST00000103799 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm22190-201ENSMUST00000103827 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm22191-201ENSMUST00000103831 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24721-201ENSMUST00000103849 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm28018-201ENSMUST00000103869 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm26399-201ENSMUST00000103937 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm25349-201ENSMUST00000177728 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm23616-201ENSMUST00000177797 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm25871-201ENSMUST00000177816 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24752-201ENSMUST00000178240 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24496-201ENSMUST00000178287 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm25649-201ENSMUST00000178476 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm25548-201ENSMUST00000178681 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm23147-201ENSMUST00000178841 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm26095-201ENSMUST00000179270 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm22171-201ENSMUST00000179283 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm23936-201ENSMUST00000179354 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm22619-201ENSMUST00000179516 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm25255-201ENSMUST00000179579 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24755-201ENSMUST00000179691 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm26506-201ENSMUST00000179692 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm25086-201ENSMUST00000179931 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm23243-201ENSMUST00000180047 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24659-201ENSMUST00000180212 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm24169-201ENSMUST00000180244 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm23689-201ENSMUST00000180354 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm27359-201ENSMUST00000184153 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm27785-201ENSMUST00000184268 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm27466-201ENSMUST00000184396 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gm27703-201ENSMUST00000184836 110 ntBASIC12.27□□□□□ -0.44
Col6a5A6H584 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a5A6H584 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a5A6H584 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a5A6H584 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC12.27□□□□□ -0.44
Col6a5A6H584 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a5A6H584 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a5A6H584 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a5A6H584 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.26□□□□□ -0.45
Col6a5A6H584 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms