Protein–RNA interactions for Protein: A2AT37

Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), mousemouse

Known RBP Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf2A2AT37 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.38■■□□□ 1.01
Upf2A2AT37 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Upf2A2AT37 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Upf2A2AT37 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upf2A2AT37 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC21.38■■□□□ 1.01
Upf2A2AT37 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upf2A2AT37 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Upf2A2AT37 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Upf2A2AT37 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upf2A2AT37 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC21.37■■□□□ 1.01
Upf2A2AT37 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.37■■□□□ 1.01
Upf2A2AT37 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Upf2A2AT37 Gm10653-202ENSMUST00000139570 835 ntBASIC21.37■■□□□ 1.01
Upf2A2AT37 Gm27463-201ENSMUST00000183569 57 ntBASIC21.37■■□□□ 1.01
Upf2A2AT37 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.37■■□□□ 1.01
Upf2A2AT37 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.37■■□□□ 1.01
Upf2A2AT37 Gm18115-201ENSMUST00000221209 621 ntBASIC21.37■■□□□ 1.01
Upf2A2AT37 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upf2A2AT37 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Upf2A2AT37 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Upf2A2AT37 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Upf2A2AT37 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf2A2AT37 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Upf2A2AT37 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.35■■□□□ 1.01
Upf2A2AT37 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Upf2A2AT37 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.35■■□□□ 1.01
Upf2A2AT37 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC21.35■■□□□ 1.01
Upf2A2AT37 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upf2A2AT37 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Upf2A2AT37 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC21.34■■□□□ 1.01
Upf2A2AT37 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.34■■□□□ 1.01
Upf2A2AT37 Gm715-201ENSMUST00000117865 831 ntBASIC21.34■■□□□ 1.01
Upf2A2AT37 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.34■■□□□ 1.01
Upf2A2AT37 Gm21814-202ENSMUST00000203277 873 ntBASIC21.34■■□□□ 1.01
Upf2A2AT37 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Upf2A2AT37 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Upf2A2AT37 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Upf2A2AT37 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upf2A2AT37 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upf2A2AT37 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upf2A2AT37 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Upf2A2AT37 Gm19430-201ENSMUST00000193847 2137 ntBASIC21.33■■□□□ 1.01
Upf2A2AT37 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upf2A2AT37 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Upf2A2AT37 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.33■■□□□ 1
Upf2A2AT37 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms