Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Gm3880A0A1B0GSB3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Gm8503-201ENSMUST00000118131 455 ntBASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Gm37805-201ENSMUST00000192612 1094 ntBASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Gm43530-201ENSMUST00000195920 274 ntBASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Gm3880A0A1B0GSB3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Gm3880A0A1B0GSB3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms