Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Igkv3-5A0A140T8M6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Gm5643-201ENSMUST00000117081 966 ntBASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Gm8839-201ENSMUST00000121279 1645 ntBASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Igkv3-5A0A140T8M6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Igkv3-5A0A140T8M6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC10.27□□□□□ -0.76
Igkv3-5A0A140T8M6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Igkv3-5A0A140T8M6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Igkv3-5A0A140T8M6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Igkv3-5A0A140T8M6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Gm20760-201ENSMUST00000179197 648 ntBASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Igkv3-5A0A140T8M6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms