Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Gm27011-201ENSMUST00000182352 972 ntBASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc194A0A140LIT1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc194A0A140LIT1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc194A0A140LIT1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc194A0A140LIT1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc194A0A140LIT1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Gm11539-201ENSMUST00000119837 557 ntBASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Gm18115-201ENSMUST00000221209 621 ntBASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc194A0A140LIT1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Gm13474-201ENSMUST00000122466 815 ntBASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Gm2274-201ENSMUST00000184539 609 ntBASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Gm30025-201ENSMUST00000218555 728 ntBASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Phf7-203ENSMUST00000226565 1971 ntBASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc194A0A140LIT1 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc194A0A140LIT1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Gm16061-201ENSMUST00000122167 857 ntBASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms