Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.22□□□□□ -0.61
Trav9d-4A0A0G2JG37 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mir6349-201ENSMUST00000184059 97 ntBASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9d-4A0A0G2JG37 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav9d-4A0A0G2JG37 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms