Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv12-1A0A0B4J1H0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gm27357-201ENSMUST00000183754 135 ntBASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv12-1A0A0B4J1H0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm7284-201ENSMUST00000131667 944 ntBASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mir6404-201ENSMUST00000183699 94 ntBASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms