Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm12382-201ENSMUST00000122005 922 ntBASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv1A0A0B4J1G7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm13168-201ENSMUST00000121771 632 ntBASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm6576-201ENSMUST00000169678 883 ntBASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm42545-201ENSMUST00000202755 922 ntBASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv1A0A0B4J1G7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv1A0A0B4J1G7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm13401-201ENSMUST00000117074 291 ntBASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms