Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
Ighv1-49A0A0A6YWX2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.65□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gm27463-201ENSMUST00000183569 57 ntBASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Gm22240-201ENSMUST00000175225 82 ntBASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Odf3b-204ENSMUST00000227834 930 ntBASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ighv1-49A0A0A6YWX2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms