Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Il3ra-202ENSMUST00000223589 738 ntBASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm42569-201ENSMUST00000200539 472 ntBASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav6d-5A0A075B6B9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Trav6d-5A0A075B6B9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Actl10-202ENSMUST00000226583 1501 ntBASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm27405-201ENSMUST00000184201 112 ntBASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms