Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm26833-201ENSMUST00000180899 440 ntBASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12d-3A0A075B6A4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm15546-201ENSMUST00000122095 826 ntBASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12d-3A0A075B6A4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm11643-201ENSMUST00000119578 864 ntBASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12d-3A0A075B6A4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms