Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav5-4A0A075B652 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav5-4A0A075B652 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5-4A0A075B652 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav5-4A0A075B652 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.65□□□□□ -0.23
Trav5-4A0A075B652 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms