Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm7791-201ENSMUST00000219066 539 ntBASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm10698-201ENSMUST00000182663 604 ntBASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-4-dv10A0A075B651 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm13186-201ENSMUST00000118031 316 ntBASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-4-dv10A0A075B651 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms