Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm36967-201ENSMUST00000193814 266 ntBASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-7-dv9A0A075B639 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trav6-7-dv9A0A075B639 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-7-dv9A0A075B639 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-7-dv9A0A075B639 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-7-dv9A0A075B639 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms