Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav16nA0A075B634 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16nA0A075B634 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16nA0A075B634 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16nA0A075B634 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16nA0A075B634 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav16nA0A075B634 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16nA0A075B634 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Gm11249-201ENSMUST00000117071 859 ntBASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Gm12896-201ENSMUST00000118430 226 ntBASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16nA0A075B634 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms