Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav7n-4A0A075B620 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Gm44549-201ENSMUST00000208351 577 ntBASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav7n-4A0A075B620 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav7n-4A0A075B620 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Trav7n-4A0A075B620 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav7n-4A0A075B620 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav7n-4A0A075B620 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav7n-4A0A075B620 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Gm11927-201ENSMUST00000118472 759 ntBASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Gm7291-201ENSMUST00000199147 382 ntBASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms