Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Gm42545-201ENSMUST00000202755 922 ntBASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Gm20049-201ENSMUST00000219950 730 ntBASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-6A0A075B603 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-6A0A075B603 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Gm27275-201ENSMUST00000184318 272 ntBASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.2□□□□□ -0.46
Trav6-6A0A075B603 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms