Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Asic1-205ENSMUST00000228185 1818 ntBASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav6-1A0A075B5Z8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-1A0A075B5Z8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-1A0A075B5Z8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-1A0A075B5Z8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-1A0A075B5Z8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-1A0A075B5Z8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-1A0A075B5Z8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm13186-201ENSMUST00000118031 316 ntBASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm10698-201ENSMUST00000182663 604 ntBASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-1A0A075B5Z8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms