Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav1A0A075B5Z4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav1A0A075B5Z4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav1A0A075B5Z4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Gm37722-201ENSMUST00000193757 208 ntBASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav1A0A075B5Z4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trav1A0A075B5Z4 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.14■□□□□ 0.01
Trav1A0A075B5Z4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.14■□□□□ 0.01
Trav1A0A075B5Z4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav1A0A075B5Z4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav1A0A075B5Z4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav1A0A075B5Z4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms