Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC130650.2-201ENST00000618736 2403 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 SNORA71.3-201ENST00000362582 128 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RNU1-18P-201ENST00000363062 164 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RNU6-777P-201ENST00000364265 104 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 OR5H15-201ENST00000383696 930 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 SNORA75-201ENST00000384158 137 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 Y_RNA.559-201ENST00000384686 107 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 MIR607-201ENST00000385241 96 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RNU6-952P-201ENST00000391164 108 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AL121972.1-201ENST00000402023 252 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AL031779.1-201ENST00000415663 330 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC244098.2-201ENST00000422068 99 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RPL21P109-201ENST00000422213 475 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 BMI1P1-201ENST00000445879 941 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC104073.1-201ENST00000451988 151 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 SNRPGP9-201ENST00000456025 225 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RNU6-956P-201ENST00000458868 103 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RNA5SP269-201ENST00000459032 137 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 MEMO1P3-201ENST00000459811 302 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AL136126.1-201ENST00000473603 402 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC026412.2-201ENST00000512270 1075 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RN7SKP13-201ENST00000515933 244 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RNU6-150P-201ENST00000516237 95 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RN7SKP83-201ENST00000516512 178 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AP000873.5-201ENST00000533906 236 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC022880.1-201ENST00000534017 973 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 KLKP1-201ENST00000595979 403 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC025165.5-201ENST00000602802 578 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 HMGN2P28-201ENST00000606102 262 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AL732372.2-225ENST00000642124 456 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 MTCO1P23-201ENST00000415223 1526 ntBASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX9Q9Y5X1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 USP8P1-201ENST00000494673 3183 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 RNU6-501P-201ENST00000364072 100 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 RNU4-91P-201ENST00000364778 135 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 MIR218-2-201ENST00000385006 110 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 Y_RNA.599-201ENST00000410489 109 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 CDK8P2-201ENST00000415020 547 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 DBIP2-201ENST00000419076 262 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 MTND1P28-201ENST00000435623 950 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 CYCSP43-201ENST00000438233 310 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AL031667.1-201ENST00000440222 725 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AL592447.1-201ENST00000447592 540 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC026410.2-201ENST00000460281 156 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 RN7SL330P-201ENST00000469709 307 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 HSPA8P13-201ENST00000523715 472 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 LSM6P2-201ENST00000552208 177 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC091489.2-201ENST00000566263 604 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC006116.10-201ENST00000591836 581 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC022146.1-201ENST00000595307 847 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 AC008739.3-201ENST00000603262 127 ntBASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX9Q9Y5X1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms