Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 MIR1276-201ENST00000408707 83 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AP000275.1-201ENST00000411943 390 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 RNU6-717P-201ENST00000459076 104 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AC025033.1-201ENST00000463883 194 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AC079804.2-201ENST00000490376 200 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 Y_RNA.670-201ENST00000516255 105 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 COX6CP5-201ENST00000527162 228 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AC010546.1-201ENST00000569391 485 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AC096586.2-201ENST00000610260 441 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 AC010678.1-201ENST00000614118 713 ntBASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.48□□□□□ -2.01
PHRF1Q9P1Y6 RNA5SP160-201ENST00000364866 120 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 SNORA67.5-201ENST00000391036 107 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 RNU2-20P-201ENST00000410425 191 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 USP9YP27-201ENST00000418455 438 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 AL590762.3-201ENST00000436372 640 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 AC078918.1-201ENST00000498515 228 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 TMEM248P1-201ENST00000510579 951 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 MTND2P17-201ENST00000550281 688 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 RPS3AP4-201ENST00000555161 764 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 AC067838.1-201ENST00000606064 577 ntBASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
PHRF1Q9P1Y6 USP9YP6-201ENST00000413550 854 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 HIGD1AP11-201ENST00000438361 280 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AL590664.1-201ENST00000448065 339 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 USP9YP34-201ENST00000453983 808 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 RPS26P21-201ENST00000475397 348 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AC011352.3-201ENST00000505162 593 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 OR4P1P-201ENST00000530808 1136 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 RPL23AP88-201ENST00000605759 454 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AC116447.1-201ENST00000613153 453 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AL589994.2-201ENST00000621124 579 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 Z82209.1-201ENST00000422141 2135 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 RPL23AP20-201ENST00000447965 421 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 HAUS1P1-201ENST00000505275 832 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AC067805.1-201ENST00000559344 470 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AC004943.3-201ENST00000624116 600 ntBASIC2.46□□□□□ -2.02
PHRF1Q9P1Y6 AC103988.1-201ENST00000566382 2177 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AC243772.1-201ENST00000451620 410 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 RNU7-95P-201ENST00000459222 64 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 RPS29P12-201ENST00000460178 152 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 TRBV8-1-201ENST00000481590 279 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AC006483.1-201ENST00000487308 313 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AC090543.1-201ENST00000492168 485 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AC104564.1-201ENST00000493028 407 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AC015849.6-201ENST00000605454 474 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AL121917.1-203ENST00000605534 577 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 SEPT7P7-201ENST00000420492 1301 ntBASIC2.45□□□□□ -2.02
PHRF1Q9P1Y6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 RNA5SP37-201ENST00000365420 130 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 RNU2-17P-201ENST00000410290 190 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 AC092638.1-201ENST00000411966 1275 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 HMGB1P12-201ENST00000438594 598 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 RPL23AP58-201ENST00000440453 469 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 PTGES3P5-201ENST00000455109 434 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 CDC42P1-201ENST00000456658 548 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 AC068781.1-201ENST00000488231 618 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 MLLT10P2-201ENST00000506434 249 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 CBX3P4-201ENST00000538909 354 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 AC090751.1-201ENST00000566966 267 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 AL121594.5-201ENST00000631724 573 ntBASIC2.44□□□□□ -2.02
PHRF1Q9P1Y6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PHRF1Q9P1Y6 RNA5SP105-201ENST00000391123 113 ntBASIC2.43□□□□□ -2.02
PHRF1Q9P1Y6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.43□□□□□ -2.02
PHRF1Q9P1Y6 XKRY2-201ENST00000442362 1093 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms