Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 NACA3P-201ENST00000359690 648 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 RNU6-1155P-201ENST00000363554 107 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 SNORA25.6-201ENST00000364121 118 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 MIR34B-201ENST00000385076 84 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC092638.1-201ENST00000411966 1275 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 TAF13P2-201ENST00000416876 286 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL137014.1-201ENST00000420490 1226 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 RPL7P30-201ENST00000420888 709 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL121882.1-201ENST00000422893 417 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 RPL35AP12-201ENST00000425362 338 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 LSM1P1-201ENST00000438629 273 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 RAC1P7-201ENST00000445367 377 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL671855.1-201ENST00000446875 1203 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 Z82190.1-201ENST00000454534 490 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC090136.1-201ENST00000520009 240 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC100870.1-201ENST00000522035 505 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC004486.1-201ENST00000546846 233 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 CYCSP39-201ENST00000565821 309 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC020895.1-201ENST00000595362 272 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 U73023.1-201ENST00000603134 700 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL160237.3-201ENST00000604114 1013 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC002487.1-201ENST00000604565 994 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 SNHG22-203ENST00000617833 660 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AC002064.3-201ENST00000623448 346 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 AL121594.5-201ENST00000631724 573 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 CYP3A51P-201ENST00000633513 256 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 ZNF849P-201ENST00000594711 1566 ntBASIC2.52□□□□□ -2.01
VAPAQ9P0L0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 RNU6-353P-201ENST00000364266 108 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 MIR670-201ENST00000390142 98 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AL138827.1-201ENST00000402666 306 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 KRR1P1-201ENST00000419430 803 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 SFR1P2-201ENST00000421841 730 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AC092573.2-201ENST00000434546 243 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 RFC5P1-201ENST00000454419 874 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AP001992.1-205ENST00000462248 379 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 RNA5SP341-201ENST00000516261 117 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AC087373.1-201ENST00000524920 491 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AC011260.1-201ENST00000578420 472 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 RPL12P50-201ENST00000603116 116 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AL512506.2-201ENST00000624472 458 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 OR8B1P-202ENST00000641132 1178 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 MTCO1P23-201ENST00000415223 1526 ntBASIC2.51□□□□□ -2.01
VAPAQ9P0L0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VAPAQ9P0L0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 MTND5P1-201ENST00000445440 1375 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 RNU6-882P-201ENST00000391025 103 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AP002784.2-201ENST00000397300 549 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 UBA52P6-201ENST00000399822 382 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AL133264.1-201ENST00000407157 562 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AL356320.2-201ENST00000417263 507 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 RPL21P133-201ENST00000443666 476 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC044797.1-201ENST00000445744 679 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 MTCO1P48-201ENST00000448024 1096 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 OR51B8P-201ENST00000449892 769 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms