Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNA5SP113-201ENST00000410486 84 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RPS23P10-201ENST00000416185 486 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 MTCO1P39-201ENST00000426148 480 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 OR2AS1P-201ENST00000427827 319 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 ELOCP14-201ENST00000428070 331 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RPS15AP9-201ENST00000439856 381 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 ELOCP7-201ENST00000439968 331 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 OR1H1P-201ENST00000448731 937 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 SNRPGP6-201ENST00000451124 220 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RPS24P6-201ENST00000452670 400 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC008481.1-201ENST00000463278 396 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC007537.2-201ENST00000472093 511 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC078817.1-201ENST00000492623 435 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 Y_RNA.704-201ENST00000516851 102 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 IGLV2-28-201ENST00000520681 304 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC134698.4-201ENST00000523451 826 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 PHBP17-201ENST00000528576 541 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC109635.3-201ENST00000529536 185 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC104383.1-201ENST00000530297 370 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC006504.3-201ENST00000586818 523 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AL139395.1-201ENST00000603662 160 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AL160290.3-201ENST00000604869 165 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AP001596.2-201ENST00000608410 312 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 SNHG22-203ENST00000617833 660 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC005609.4-201ENST00000625071 447 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 MIR4275-201ENST00000636486 87 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC010733.2-201ENST00000589496 5702 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC010928.1-201ENST00000592477 1447 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC021146.4-201ENST00000309229 279 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 Y_RNA.22-201ENST00000362492 102 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 RNU6-1090P-201ENST00000364065 94 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 SNORD74.4-201ENST00000364129 80 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MIR1-2-201ENST00000384961 85 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MIR765-201ENST00000390226 114 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AL645733.1-201ENST00000402250 217 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AL136372.1-201ENST00000403060 228 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MED13P1-201ENST00000428342 171 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 RPS20P5-201ENST00000434808 360 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC027673.1-201ENST00000456245 405 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 snoU13.24-201ENST00000458998 104 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC106872.2-201ENST00000494303 480 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 KLHL2P1-201ENST00000508691 521 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 SNORA31.22-201ENST00000517204 135 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 HMGB1P41-201ENST00000520234 440 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC008489.1-201ENST00000524271 483 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC021006.3-201ENST00000530771 192 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AP001880.2-201ENST00000538233 448 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AP002360.4-201ENST00000606980 481 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC004067.1-201ENST00000608733 700 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AL121612.2-201ENST00000612261 482 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MIR6891-201ENST00000618788 93 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AC019278.1-201ENST00000623516 479 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 AP002799.1-201ENST00000623552 423 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MIR1321-201ENST00000637766 79 ntBASIC4.43□□□□□ -1.7
MKS1Q9NXB0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MKS1Q9NXB0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
MKS1Q9NXB0 AC009812.4-201ENST00000569134 1805 ntBASIC4.42□□□□□ -1.7
MKS1Q9NXB0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms