Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC092634.2-201ENST00000428146 1010 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC005326.1-201ENST00000429197 123 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 SEPT7P5-201ENST00000434048 306 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC091862.1-201ENST00000438016 1100 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC093155.1-201ENST00000440164 826 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.58□□□□□ -2
CLN6Q9NWW5 RPS4XP10-201ENST00000465034 731 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC104164.3-201ENST00000467363 1258 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC006445.2-201ENST00000510061 472 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC104417.1-201ENST00000523974 751 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.58□□□□□ -2
CLN6Q9NWW5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AL157394.1-201ENST00000562983 1224 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC138915.2-201ENST00000569776 97 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AL445435.1-201ENST00000604232 665 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 HSPE1P7-201ENST00000604681 321 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC120053.1-201ENST00000607706 736 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC005046.1-201ENST00000608515 625 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC018926.1-201ENST00000616335 435 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AC007275.1-201ENST00000621243 671 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 AL157770.1-201ENST00000623049 439 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CLN6Q9NWW5 U6.105-201ENST00000637379 88 ntBASIC2.58□□□□□ -2
CLN6Q9NWW5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.58□□□□□ -2
CLN6Q9NWW5 AC092593.1-201ENST00000515413 1815 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLN6Q9NWW5 MIR26A1-201ENST00000362205 77 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 SNORA63.1-201ENST00000362493 131 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 SNORA63.3-201ENST00000362682 132 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 RNU6-707P-201ENST00000364647 95 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 SNORA62.3-201ENST00000365110 153 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 MIR183-201ENST00000384958 110 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 MIR506-201ENST00000384998 124 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 SNORA26.7-201ENST00000391288 122 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 SNRPEP2-201ENST00000397592 279 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CLN6Q9NWW5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLN6Q9NWW5 LUZP4P1-201ENST00000415420 344 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 HMGN2P30-201ENST00000423237 256 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 MTCO1P3-201ENST00000429327 192 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AC024082.2-201ENST00000434771 238 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.57□□□□□ -2
CLN6Q9NWW5 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 MRPL50P4-201ENST00000446432 475 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AL590639.1-201ENST00000456484 337 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 RN7SL601P-201ENST00000471221 293 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.57□□□□□ -2
CLN6Q9NWW5 OR2A20P-203ENST00000498397 1268 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AC093801.2-201ENST00000503966 1050 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 DSTNP2-201ENST00000504533 515 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 AC008837.1-201ENST00000511513 412 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 MTCO3P15-201ENST00000526563 574 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AP000867.2-201ENST00000532468 320 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 AC087894.1-201ENST00000538359 518 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 AC125611.2-201ENST00000551907 647 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 NBEAP1-201ENST00000554452 979 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AL355836.1-201ENST00000555951 870 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AADACP1-206ENST00000561502 1193 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 AC015688.2-201ENST00000584523 262 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AL133507.1-201ENST00000605269 557 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 TUG1_1.1-201ENST00000610654 145 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 AC131902.3-201ENST00000611767 581 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.57□□□□□ -2
CLN6Q9NWW5 FAM35BP-202ENST00000497389 3337 ntBASIC2.57□□□□□ -2
CLN6Q9NWW5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.57□□□□□ -2
CLN6Q9NWW5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLN6Q9NWW5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CLN6Q9NWW5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.56□□□□□ -2
CLN6Q9NWW5 AC009812.4-201ENST00000569134 1805 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
CLN6Q9NWW5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
CLN6Q9NWW5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.56□□□□□ -2
CLN6Q9NWW5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLN6Q9NWW5 MIR135A2-201ENST00000384854 100 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL21P75-201ENST00000396599 483 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL21P28-201ENST00000401418 483 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AL592114.1-201ENST00000403842 483 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RNU2-43P-201ENST00000410306 190 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 BEND7P1-201ENST00000422058 457 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL21P2-201ENST00000440049 481 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AL592447.1-201ENST00000447592 540 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms