Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 USP9YP33-201ENST00000412220 421 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AL137014.1-201ENST00000420490 1226 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 RPS15AP6-201ENST00000420703 385 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 MTND1P32-201ENST00000433043 938 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 USP9YP35-201ENST00000435696 412 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 CST9LP2-201ENST00000437612 320 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 RSL24D1P3-201ENST00000449255 495 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 RPL31P50-201ENST00000471002 296 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AC023424.2-201ENST00000493479 777 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 LRRC34P1-201ENST00000542742 915 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 RPL21P12-201ENST00000559810 515 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 ZNF415P1-201ENST00000582279 1166 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AL158042.1-201ENST00000605338 460 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AP002791.1-201ENST00000623291 381 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AC091152.2-201ENST00000591628 2569 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AC011477.1-204ENST00000623416 1325 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AL672296.1-201ENST00000427780 2158 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC138915.3-201ENST00000562908 1389 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 MIR34B-201ENST00000385076 84 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 MTND4P13-201ENST00000402078 1023 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 HIGD1AP15-201ENST00000416198 280 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 ANKRD26P4-201ENST00000455755 950 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 HMGN2P16-201ENST00000456802 261 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 SNRPGP3-201ENST00000469405 227 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC093278.1-201ENST00000494700 600 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC004062.1-201ENST00000509926 645 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 RNA5SP216-201ENST00000516111 123 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 RNA5SP468-201ENST00000516782 93 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 COX6CP8-201ENST00000522620 226 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 UBE2NP1-201ENST00000545592 458 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC090615.1-201ENST00000577519 154 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC008507.1-201ENST00000587506 734 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC022022.2-201ENST00000602989 360 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 ELOCP35-201ENST00000604289 336 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC004853.1-201ENST00000604902 698 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 VIS1.1-201ENST00000610517 203 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC009464.1-201ENST00000615731 469 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AL355493.4-201ENST00000618530 292 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AC093010.3-201ENST00000570269 15214 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AL022578.1-201ENST00000439330 1433 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AF127577.6-201ENST00000623352 2191 ntBASIC4.19□□□□□ -1.74
SMC4Q9NTJ3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC002546.1-201ENST00000588041 2504 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 RNU1-75P-201ENST00000347264 129 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 OR5H2-201ENST00000355273 945 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 RNU6-28P-201ENST00000362378 107 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 SNORA63.1-201ENST00000362493 131 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 SNORD113-6-201ENST00000363345 75 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 SNORA70.4-201ENST00000365509 134 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 RNU6-952P-201ENST00000391164 108 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 RPL7P52-201ENST00000449200 742 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 HMGB1P15-201ENST00000453854 435 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC006539.3-201ENST00000454258 129 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AL139824.2-201ENST00000458731 1095 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 RPL7P49-201ENST00000471402 708 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 PHBP14-201ENST00000512887 367 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC093677.1-201ENST00000514414 678 ntBASIC4.18□□□□□ -1.74
SMC4Q9NTJ3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms