Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 TTC39CP1-201ENST00000512513 755 ntBASIC2.9□□□□□ -1.95
SCAPERQ9BY12 SNORA25.15-201ENST00000516487 89 ntBASIC2.9□□□□□ -1.95
SCAPERQ9BY12 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 MTCO3P24-201ENST00000572729 782 ntBASIC2.9□□□□□ -1.95
SCAPERQ9BY12 MIR4303-201ENST00000581299 66 ntBASIC2.9□□□□□ -1.95
SCAPERQ9BY12 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 AC244517.1-201ENST00000606030 2086 ntBASIC2.89□□□□□ -1.95
SCAPERQ9BY12 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 HIGD1AP11-201ENST00000438361 280 ntBASIC2.89□□□□□ -1.95
SCAPERQ9BY12 MLLT10P2-201ENST00000506434 249 ntBASIC2.89□□□□□ -1.95
SCAPERQ9BY12 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.89□□□□□ -1.95
SCAPERQ9BY12 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.89□□□□□ -1.95
SCAPERQ9BY12 RNU6-250P-201ENST00000516958 103 ntBASIC2.89□□□□□ -1.95
SCAPERQ9BY12 MIR4255-201ENST00000579351 72 ntBASIC2.89□□□□□ -1.95
SCAPERQ9BY12 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SCAPERQ9BY12 Y_RNA.40-201ENST00000362645 93 ntBASIC2.88□□□□□ -1.95
SCAPERQ9BY12 AP000567.1-201ENST00000406413 156 ntBASIC2.88□□□□□ -1.95
SCAPERQ9BY12 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.88□□□□□ -1.95
SCAPERQ9BY12 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.88□□□□□ -1.95
SCAPERQ9BY12 GZMAP1-201ENST00000503054 631 ntBASIC2.88□□□□□ -1.95
SCAPERQ9BY12 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.88□□□□□ -1.95
SCAPERQ9BY12 AC067805.1-201ENST00000559344 470 ntBASIC2.88□□□□□ -1.95
SCAPERQ9BY12 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.88□□□□□ -1.95
SCAPERQ9BY12 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.88□□□□□ -1.95
SCAPERQ9BY12 ZNF720P1-201ENST00000562403 1939 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SCAPERQ9BY12 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCAPERQ9BY12 SET-203ENST00000372688 801 ntTSL 2 BASIC2.87□□□□□ -1.95
SCAPERQ9BY12 MIR489-201ENST00000384923 84 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 RNU6-603P-201ENST00000411403 107 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 MTCO3P30-201ENST00000426425 670 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 RPS15AP7-201ENST00000439294 405 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.87□□□□□ -1.95
SCAPERQ9BY12 TRMT112P2-201ENST00000512910 132 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.87□□□□□ -1.95
SCAPERQ9BY12 AC091057.2-201ENST00000602594 792 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 AL135786.2-201ENST00000608422 615 ntBASIC2.87□□□□□ -1.95
SCAPERQ9BY12 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.87□□□□□ -1.95
SCAPERQ9BY12 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AL139276.1-201ENST00000311910 1001 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 MIRLET7G-201ENST00000362280 84 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 SNORA51.11-201ENST00000384442 131 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 RPS15AP12-201ENST00000419498 388 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCAPERQ9BY12 MTND4LP13-201ENST00000425022 298 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AC009965.2-201ENST00000425328 970 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 XKRYP6-201ENST00000440468 1116 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 XKRYP3-201ENST00000442113 1116 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AC124916.1-201ENST00000444020 547 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AL163540.1-201ENST00000485382 386 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 SNX5P1-201ENST00000505757 1041 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AL121917.1-203ENST00000605534 577 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AC116447.1-201ENST00000613153 453 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
SCAPERQ9BY12 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SCAPERQ9BY12 AC004520.1-201ENST00000608362 1413 ntBASIC2.86□□□□□ -1.95
SCAPERQ9BY12 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCAPERQ9BY12 CBWD4P-201ENST00000445695 655 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 OR51B8P-201ENST00000449892 769 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AC079804.2-201ENST00000490376 200 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 COX6CP5-201ENST00000527162 228 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 FAM92A1P1-201ENST00000528023 890 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 SUB1P3-201ENST00000564581 315 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
SCAPERQ9BY12 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AC005336.3-201ENST00000623833 2679 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.85□□□□□ -1.95
SCAPERQ9BY12 RNA5SP393-201ENST00000363423 117 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.85□□□□□ -1.95
SCAPERQ9BY12 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AC023424.2-201ENST00000493479 777 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AC117532.1-201ENST00000514638 323 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 AC084757.1-201ENST00000559987 490 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 MIR8081-201ENST00000611533 95 ntBASIC2.85□□□□□ -1.95
SCAPERQ9BY12 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCAPERQ9BY12 AC005539.1-201ENST00000443768 1479 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 SNORA25.9-201ENST00000365087 128 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.84□□□□□ -1.96
SCAPERQ9BY12 MIR1294-201ENST00000408503 142 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.84□□□□□ -1.96
SCAPERQ9BY12 FNDC3CP-201ENST00000420795 1155 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 SUMO1P4-201ENST00000429430 302 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 AC140059.1-201ENST00000489238 361 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 RPL21P131-201ENST00000497298 483 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 RN7SKP82-201ENST00000516786 223 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms