Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 HSPD1P16-201ENST00000402302 394 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 AL445213.1-201ENST00000412589 747 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
COL12A1Q99715 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.58□□□□□ -2.16
COL12A1Q99715 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.58□□□□□ -2.16
COL12A1Q99715 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.58□□□□□ -2.16
COL12A1Q99715 MIR4421-201ENST00000578133 69 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 AC002487.1-201ENST00000604565 994 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.58□□□□□ -2.16
COL12A1Q99715 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.58□□□□□ -2.16
COL12A1Q99715 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL12A1Q99715 RNU6-1223P-201ENST00000517124 104 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.58□□□□□ -2.16
COL12A1Q99715 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.58□□□□□ -2.16
COL12A1Q99715 AC006023.2-201ENST00000609916 167 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 OR4G1P-203ENST00000641984 1631 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
COL12A1Q99715 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL12A1Q99715 Y_RNA.433-201ENST00000384089 102 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 DNAJC19P6-201ENST00000401853 280 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 RNU2-20P-201ENST00000410425 191 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 RPL7P46-201ENST00000425129 740 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 ATP5F1P1-201ENST00000433775 569 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 EIF2S2P4-201ENST00000461070 984 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
COL12A1Q99715 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.58□□□□□ -2.16
COL12A1Q99715 AL389895.1-201ENST00000554127 252 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 NF1P5-201ENST00000588287 448 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 AC013562.2-201ENST00000611632 603 ntBASIC1.58□□□□□ -2.16
COL12A1Q99715 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL12A1Q99715 AC092447.7-201ENST00000422212 1621 ntBASIC1.57□□□□□ -2.16
COL12A1Q99715 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL12A1Q99715 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.57□□□□□ -2.16
COL12A1Q99715 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.57□□□□□ -2.16
COL12A1Q99715 HAR1A.1-201ENST00000459583 118 ntBASIC1.57□□□□□ -2.16
COL12A1Q99715 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.57□□□□□ -2.16
COL12A1Q99715 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.57□□□□□ -2.16
COL12A1Q99715 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.57□□□□□ -2.16
COL12A1Q99715 AC024560.3-201ENST00000608482 349 ntBASIC1.57□□□□□ -2.16
COL12A1Q99715 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL12A1Q99715 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.57□□□□□ -2.16
COL12A1Q99715 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.57□□□□□ -2.16
COL12A1Q99715 Y_RNA.681-201ENST00000516445 113 ntBASIC1.57□□□□□ -2.16
COL12A1Q99715 TPMTP1-201ENST00000592307 737 ntBASIC1.57□□□□□ -2.16
COL12A1Q99715 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
COL12A1Q99715 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL12A1Q99715 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL12A1Q99715 MTND4P23-201ENST00000447723 1363 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 Y_RNA.393-201ENST00000383936 102 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 RNU6-328P-201ENST00000390887 106 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.56□□□□□ -2.16
COL12A1Q99715 AC011712.1-201ENST00000588959 234 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 AC245036.5-201ENST00000596330 847 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL12A1Q99715 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL12A1Q99715 AC093775.1-201ENST00000624154 1868 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
COL12A1Q99715 USP9YP8-201ENST00000441913 500 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 AIG1P1-201ENST00000503376 148 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 MIR1273G-201ENST00000577677 100 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 VN1R7P-201ENST00000619242 903 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.56□□□□□ -2.16
COL12A1Q99715 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.56□□□□□ -2.16
COL12A1Q99715 DDX10P1-201ENST00000448545 1933 ntBASIC1.56□□□□□ -2.16
COL12A1Q99715 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL12A1Q99715 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.55□□□□□ -2.16
COL12A1Q99715 RPS15AP36-201ENST00000492022 382 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COL12A1Q99715 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL12A1Q99715 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL12A1Q99715 AC010680.1-201ENST00000590024 3590 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
COL12A1Q99715 TAS2R15P-201ENST00000390674 928 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 POLHP1-201ENST00000411806 470 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 AL138787.1-202ENST00000437804 898 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.55□□□□□ -2.16
COL12A1Q99715 MTCYBP17-201ENST00000503579 789 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.55□□□□□ -2.16
COL12A1Q99715 GLYCAM1-201ENST00000546596 285 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 MIR151B-201ENST00000584249 96 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 AC008568.2-201ENST00000623862 2313 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 AC244517.1-201ENST00000606030 2086 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 RNU6-516P-201ENST00000411381 104 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.55□□□□□ -2.16
COL12A1Q99715 AC091895.1-201ENST00000624494 256 ntBASIC1.55□□□□□ -2.16
COL12A1Q99715 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.55□□□□□ -2.16
COL12A1Q99715 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL12A1Q99715 AL513331.1-201ENST00000411908 397 ntBASIC1.54□□□□□ -2.16
COL12A1Q99715 RNA5SP385-201ENST00000515947 110 ntBASIC1.54□□□□□ -2.16
COL12A1Q99715 RNU2-58P-201ENST00000516403 183 ntBASIC1.54□□□□□ -2.16
COL12A1Q99715 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.54□□□□□ -2.16
COL12A1Q99715 AL391646.1-201ENST00000603860 190 ntBASIC1.54□□□□□ -2.16
COL12A1Q99715 MIR98-201ENST00000606724 119 ntBASIC1.54□□□□□ -2.16
COL12A1Q99715 uc_338.5-201ENST00000611839 155 ntBASIC1.54□□□□□ -2.16
COL12A1Q99715 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.54□□□□□ -2.16
COL12A1Q99715 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.54□□□□□ -2.16
COL12A1Q99715 AC009541.1-201ENST00000438279 2662 ntBASIC1.54□□□□□ -2.16
COL12A1Q99715 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms