Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC024082.2-201ENST00000434771 238 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC104978.1-201ENST00000449387 391 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 ANKRD26P4-201ENST00000455755 950 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 snoU13.8-201ENST00000458890 104 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC010468.1-201ENST00000461022 817 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC097493.1-201ENST00000463958 372 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 MTND1P16-201ENST00000465177 898 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 WBP1LP4-201ENST00000505043 344 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC110768.1-201ENST00000509222 400 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC109445.1-201ENST00000512356 383 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC022483.1-201ENST00000514020 567 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 PAICSP4-201ENST00000517543 1253 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC011602.1-201ENST00000546484 331 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC011451.2-201ENST00000604303 598 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AL357080.1-201ENST00000617394 239 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 U4.6-201ENST00000621618 127 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC103706.2-201ENST00000638080 240 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 ZNF542P-204ENST00000482727 1305 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 AC110774.1-201ENST00000623567 2018 ntBASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
PDLIM5Q96HC4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PDLIM5Q96HC4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.4□□□□□ -1.86
PDLIM5Q96HC4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PDLIM5Q96HC4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 RNA5SP479-201ENST00000364858 117 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AP002088.1-201ENST00000382740 395 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 MIR135A2-201ENST00000384854 100 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 SKINT1L-201ENST00000401057 817 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 U3.42-201ENST00000408746 214 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 CYCSP19-201ENST00000411715 316 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC009518.2-201ENST00000418056 731 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC011233.1-201ENST00000422812 283 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL445584.1-201ENST00000431451 330 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL606662.1-201ENST00000445763 553 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL590664.1-201ENST00000448065 339 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 RPL23AP67-201ENST00000465341 474 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 ACTR3P3-201ENST00000480448 893 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 BET1P1-201ENST00000482276 359 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC106707.2-201ENST00000484182 374 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 RPL7P38-201ENST00000488396 739 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 RPL7P23-201ENST00000493874 747 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC135628.1-201ENST00000568867 534 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 OR4K8P-201ENST00000578842 1048 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL158042.1-201ENST00000605338 460 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL390208.1-201ENST00000605885 644 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AC009093.8-201ENST00000641769 292 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM5Q96HC4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM5Q96HC4 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
PDLIM5Q96HC4 ZNF285B-201ENST00000561698 1767 ntBASIC3.39□□□□□ -1.87
PDLIM5Q96HC4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms