Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.16□□□□□ -1.58
BRF1Q92994 AC007687.1-201ENST00000602704 304 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC079587.1-201ENST00000603846 277 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC130324.3-201ENST00000614165 542 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
BRF1Q92994 AL138713.1-201ENST00000624026 2130 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 AC090617.10-201ENST00000624308 134 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 TPTEP1-208ENST00000636884 213 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF1Q92994 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
BRF1Q92994 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BRF1Q92994 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BRF1Q92994 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.16□□□□□ -1.58
BRF1Q92994 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BRF1Q92994 AC091046.3-201ENST00000631455 1574 ntBASIC5.16□□□□□ -1.58
BRF1Q92994 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
BRF1Q92994 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
BRF1Q92994 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
BRF1Q92994 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRF1Q92994 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRF1Q92994 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRF1Q92994 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
BRF1Q92994 AC107027.3-201ENST00000565095 3473 ntBASIC5.15□□□□□ -1.58
BRF1Q92994 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.15□□□□□ -1.58
BRF1Q92994 OR1S2-201ENST00000302592 978 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BRF1Q92994 RNY3P13-201ENST00000365542 102 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 RPL32P23-201ENST00000397237 405 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 RN7SKP140-201ENST00000411196 284 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 MTND3P8-201ENST00000412909 339 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AL353678.1-201ENST00000422735 741 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF1Q92994 IFNA20P-201ENST00000436840 528 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 HMGB3P9-201ENST00000441799 583 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 MTCYBP6-201ENST00000441810 138 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.15□□□□□ -1.59
BRF1Q92994 MTND1P18-201ENST00000448191 573 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC073415.1-201ENST00000449240 153 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 RPL35AP15-201ENST00000468042 339 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC007686.1-201ENST00000488511 463 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.15□□□□□ -1.59
BRF1Q92994 AC103851.1-201ENST00000506833 274 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
BRF1Q92994 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.15□□□□□ -1.59
BRF1Q92994 IGLVIV-65-201ENST00000517313 360 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC107953.1-201ENST00000522216 297 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 PSMA2P1-201ENST00000526365 646 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 OR4P1P-201ENST00000530808 1136 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 BNIP3P6-201ENST00000549284 499 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.15□□□□□ -1.59
BRF1Q92994 AL161729.3-201ENST00000603533 673 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC004853.1-201ENST00000604902 698 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC245517.5-201ENST00000611529 162 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 MIR7154-201ENST00000620673 73 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC079684.1-201ENST00000621405 437 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 AC019278.1-201ENST00000623516 479 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
BRF1Q92994 MTND4P35-201ENST00000604257 1375 ntBASIC5.15□□□□□ -1.59
BRF1Q92994 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.15□□□□□ -1.59
BRF1Q92994 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF1Q92994 SAGE2P-201ENST00000420011 2126 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
BRF1Q92994 Y_RNA.58-201ENST00000362807 102 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 Y_RNA.154-201ENST00000363624 102 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 Y_RNA.162-201ENST00000363683 102 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 RNY3P1-201ENST00000365085 102 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 Y_RNA.326-201ENST00000365176 113 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 RNY3-201ENST00000365484 102 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
BRF1Q92994 Y_RNA.490-201ENST00000384413 102 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 MIR19A-201ENST00000384878 82 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 MIR192-201ENST00000384915 110 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 RNU6-1148P-201ENST00000410992 104 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 RAB28P1-201ENST00000411517 641 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 BTF3L4P3-201ENST00000418879 476 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 NDUFA5P4-201ENST00000436704 385 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 FTH1P1-201ENST00000437933 532 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 AL353691.1-201ENST00000451332 387 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 MTND1P9-201ENST00000453775 944 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 RPS29P33-201ENST00000456717 146 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 HMGN2P26-201ENST00000463169 339 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 RPL7P19-201ENST00000469948 618 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 AC114797.1-201ENST00000514003 728 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 AC112206.3-201ENST00000514578 389 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 AC011979.2-201ENST00000527568 352 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF1Q92994 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.14□□□□□ -1.59
BRF1Q92994 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF1Q92994 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.14□□□□□ -1.59
BRF1Q92994 MIR4443-201ENST00000585052 53 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms