Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 GNL2P1-201ENST00000451274 2190 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HPS1Q92902 PARP4P2-201ENST00000446672 3326 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HPS1Q92902 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS1Q92902 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.63□□□□□ -1.51
HPS1Q92902 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
HPS1Q92902 RPL9P7-201ENST00000330965 580 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 Y_RNA.308-201ENST00000365043 101 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 RNU6-898P-201ENST00000365627 104 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 SNORD116-14-201ENST00000383894 92 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 SNORD116-17-201ENST00000383929 92 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 SNORD116-15-201ENST00000384445 92 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 SNORD116-20-201ENST00000384529 92 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 SNORD116-19-201ENST00000384729 92 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HPS1Q92902 AL359694.1-201ENST00000403247 604 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HPS1Q92902 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.63□□□□□ -1.51
HPS1Q92902 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.63□□□□□ -1.51
HPS1Q92902 RPL12P17-201ENST00000432393 498 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 HSPD1P21-201ENST00000436541 245 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AL513043.1-201ENST00000439124 535 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 RPL26P6-201ENST00000440913 438 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 COL11A2P1-205ENST00000441798 676 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.63□□□□□ -1.51
HPS1Q92902 EEF1B2P3-201ENST00000447718 678 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.63□□□□□ -1.51
HPS1Q92902 SNORD2.1-201ENST00000458762 69 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 RN7SL413P-201ENST00000482700 297 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.63□□□□□ -1.51
HPS1Q92902 MTND3P25-201ENST00000509243 135 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 RNA5SP473-201ENST00000516402 125 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.63□□□□□ -1.51
HPS1Q92902 CASP1P1-201ENST00000526345 212 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.63□□□□□ -1.51
HPS1Q92902 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
HPS1Q92902 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.63□□□□□ -1.51
HPS1Q92902 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.63□□□□□ -1.51
HPS1Q92902 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HPS1Q92902 RN7SL802P-201ENST00000577858 299 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 MIR4659A-201ENST00000580269 81 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.63□□□□□ -1.51
HPS1Q92902 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HPS1Q92902 AC011921.2-201ENST00000589465 152 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AL670379.2-201ENST00000604983 252 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AC084757.4-201ENST00000616350 526 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 AC073349.3-201ENST00000617616 186 ntBASIC5.63□□□□□ -1.51
HPS1Q92902 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HPS1Q92902 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HPS1Q92902 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HPS1Q92902 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HPS1Q92902 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HPS1Q92902 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 AOX3P-204ENST00000491025 2107 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.62□□□□□ -1.51
HPS1Q92902 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.62□□□□□ -1.51
HPS1Q92902 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
HPS1Q92902 UBE2WP1-201ENST00000362030 340 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 Y_RNA.569-201ENST00000384749 103 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 MIR569-201ENST00000385228 96 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 SNORA40-201ENST00000388090 126 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HPS1Q92902 RNU6-607P-201ENST00000411283 108 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 CEACAMP1-201ENST00000434624 1035 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 AL162389.1-201ENST00000449233 177 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 AC007395.1-201ENST00000451333 677 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 RPL30P11-201ENST00000495304 339 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 CYCTP-201ENST00000504253 315 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 SNORD116-25-201ENST00000516517 92 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.62□□□□□ -1.51
HPS1Q92902 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.62□□□□□ -1.51
HPS1Q92902 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.62□□□□□ -1.51
HPS1Q92902 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.62□□□□□ -1.51
HPS1Q92902 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 OR1F2P-201ENST00000570470 933 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 MIR3154-201ENST00000577829 84 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.62□□□□□ -1.51
HPS1Q92902 AC114477.1-201ENST00000605097 605 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.62□□□□□ -1.51
HPS1Q92902 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HPS1Q92902 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms