Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SNORA51.1-201ENST00000363243 140 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 Y_RNA.153-201ENST00000363615 91 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 RNU1-43P-201ENST00000365052 165 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 RNU6-171P-201ENST00000384354 107 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 RNU6-821P-201ENST00000390995 107 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 DUTP5-201ENST00000406790 469 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 MIR1286-201ENST00000408112 78 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 MIR1182-201ENST00000408363 97 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AL161722.2-201ENST00000434731 981 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 RPS29P10-201ENST00000439197 166 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AC008264.1-201ENST00000447612 367 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 BX276092.4-201ENST00000452056 248 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 GSTA11P-201ENST00000452866 669 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 OR2AO1P-201ENST00000476497 403 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 Y_RNA.670-201ENST00000516255 105 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 RNU6-635P-201ENST00000516651 102 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AC087854.1-201ENST00000519706 414 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AL512329.2-201ENST00000607350 548 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AP005432.2-201ENST00000608162 586 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AL589994.2-201ENST00000621124 579 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 MIR4275-201ENST00000636486 87 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 AC000374.1-201ENST00000434698 1745 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBE3DQ7Z6J8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 PABPC1P7-201ENST00000413177 1513 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 SNORD62.1-201ENST00000362541 86 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 Y_RNA.496-201ENST00000384444 101 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 MIR1250-201ENST00000408098 113 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 Z99755.1-201ENST00000414048 380 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AC103987.1-201ENST00000473394 348 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AC010655.3-201ENST00000478818 450 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 HIGD1AP14-201ENST00000507617 282 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 Y_RNA.668-201ENST00000516233 93 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AP005902.1-201ENST00000521358 186 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 OR10G5P-201ENST00000532733 358 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AL359219.2-201ENST00000555184 348 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AC007225.2-201ENST00000562529 256 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AL670379.4-201ENST00000605279 254 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 PABPC1P6-201ENST00000445594 1829 ntBASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBE3DQ7Z6J8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 AL359893.1-201ENST00000447628 1580 ntBASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 RNU6-99P-201ENST00000364721 107 ntBASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 RNA5SP223-201ENST00000365174 120 ntBASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 Y_RNA.404-201ENST00000383978 102 ntBASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 RNU6-214P-201ENST00000384130 107 ntBASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 Y_RNA.493-201ENST00000384422 102 ntBASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 DPH3P2-201ENST00000422618 250 ntBASIC4.92□□□□□ -1.62
UBE3DQ7Z6J8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms