Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 Z99714.1-201ENST00000450463 807 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC079804.2-201ENST00000490376 200 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AP003385.6-201ENST00000531603 374 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 CR589904.2-201ENST00000612533 440 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AL136981.2-201ENST00000617319 734 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AL359757.2-201ENST00000624309 274 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC110994.2-201ENST00000635481 492 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AP001350.1-201ENST00000601906 1524 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC135776.4-201ENST00000624300 1904 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 Z82209.1-201ENST00000422141 2135 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 AC091564.4-201ENST00000533934 2194 ntBASIC2.52□□□□□ -2.01
CCDC171Q6TFL3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 RN7SKP32-201ENST00000410167 303 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 RNU4-26P-201ENST00000410270 107 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AC011753.1-201ENST00000451001 220 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AL513343.1-201ENST00000451818 792 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 RNU6-717P-201ENST00000459076 104 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 snoU13.15-201ENST00000459407 104 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AC008083.2-201ENST00000546707 476 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AL158827.2-201ENST00000602494 330 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 AL691447.3-201ENST00000635020 330 ntBASIC2.51□□□□□ -2.01
CCDC171Q6TFL3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 MTND4P1-201ENST00000457501 1466 ntBASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 DNAJC19P6-201ENST00000401853 280 ntBASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AL139156.1-201ENST00000412785 841 ntBASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 MTCYBP29-201ENST00000436327 1006 ntBASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AC019227.1-201ENST00000526902 510 ntBASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AC008962.1-201ENST00000605729 304 ntBASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 AL356266.1-201ENST00000623311 483 ntBASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CCDC171Q6TFL3 MIR504-201ENST00000385065 83 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 RNU4-65P-201ENST00000410473 140 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC233981.1-201ENST00000423224 461 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 SNRPEP4-201ENST00000435815 279 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AL031663.1-201ENST00000437445 219 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 RPL23AP7-203ENST00000449021 469 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 MTND2P8-201ENST00000450555 1025 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC025033.1-201ENST00000463883 194 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 RBM43P1-201ENST00000476891 1081 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC109486.1-201ENST00000486833 374 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 OR4G11P-201ENST00000492842 939 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 RANP3-201ENST00000530970 276 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 YWHAZP1-201ENST00000556286 722 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC098826.3-201ENST00000603823 466 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AL392112.1-201ENST00000605115 829 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 AC012213.4-201ENST00000606457 354 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 VIS1.1-201ENST00000610517 203 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 RMST_5.1-201ENST00000618704 126 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 MAPK10-266ENST00000641066 6555 ntBASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC171Q6TFL3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 RNA5SP160-201ENST00000364866 120 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 SNORA67.3-201ENST00000384366 140 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 RNA5SP338-201ENST00000410495 85 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 MTCO3P30-201ENST00000426425 670 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 Z98742.2-201ENST00000431564 187 ntBASIC2.48□□□□□ -2.01
CCDC171Q6TFL3 USP9YP8-201ENST00000441913 500 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms