Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL049780.3-201ENST00000624612 1583 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 NUP58P1-201ENST00000502546 1738 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ATL3Q6DD88 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
ATL3Q6DD88 RNU6-707P-201ENST00000364647 95 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 RNU6-1077P-201ENST00000410506 102 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC092634.6-201ENST00000418558 192 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 KRR1P1-201ENST00000419430 803 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC104332.2-201ENST00000429959 156 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 SNRPEP4-201ENST00000435815 279 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 MTCYBP34-201ENST00000439552 670 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 MRPL50P4-201ENST00000446432 475 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 RPS27AP9-201ENST00000477681 438 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AL391156.1-201ENST00000554965 554 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC012493.2-201ENST00000595083 291 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC055876.5-201ENST00000605667 259 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC024060.1-201ENST00000607052 494 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC093673.2-201ENST00000609674 331 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AC087821.2-201ENST00000637086 450 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
ATL3Q6DD88 FAM35BP-202ENST00000497389 3337 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATL3Q6DD88 AL645568.2-201ENST00000432815 1337 ntBASIC3.15□□□□□ -1.91
ATL3Q6DD88 SGO1P2-201ENST00000429458 1589 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATL3Q6DD88 AP002907.1-201ENST00000606361 1430 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 ANKRD36P1-201ENST00000344424 659 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 RNU1-100P-201ENST00000365255 165 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 SUGT1P1-201ENST00000379514 476 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 SNORA51.6-201ENST00000384151 125 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 RNU6-1000P-201ENST00000391066 106 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 CYCSP45-201ENST00000402289 315 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 RNU6-712P-201ENST00000410558 100 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 RPL36AP6-201ENST00000435770 321 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 COX6CP2-201ENST00000444980 225 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 RPL23AP31-201ENST00000456160 467 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 AP001025.2-201ENST00000490908 477 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 AC093767.1-201ENST00000504523 156 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 BOLA3P3-201ENST00000505182 232 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 SNORA31.8-201ENST00000516327 108 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 EEF1B2P4-201ENST00000551398 348 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 MTCYBP27-201ENST00000555160 670 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.14□□□□□ -1.91
ATL3Q6DD88 AC092447.7-201ENST00000422212 1621 ntBASIC3.14□□□□□ -1.91
ATL3Q6DD88 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ATL3Q6DD88 RNU6-1066P-201ENST00000363573 105 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 SNORD82-201ENST00000365530 70 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AL389915.1-201ENST00000422463 466 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AL451062.2-201ENST00000427515 271 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC096751.1-202ENST00000502691 1067 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC093752.1-206ENST00000511823 336 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATL3Q6DD88 SNORA48.10-201ENST00000516965 160 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AL157394.1-201ENST00000562983 1224 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC010738.1-201ENST00000604970 987 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC091946.2-201ENST00000606105 291 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AC010975.3-201ENST00000618727 978 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AL049777.1-201ENST00000622740 518 ntBASIC3.13□□□□□ -1.91
ATL3Q6DD88 AP003485.1-201ENST00000625093 753 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms