Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MTCO1P40-201ENST00000574371 625 ntBASIC1.62□□□□□ -2.15
SSBP1Q04837 MIR1254-2-201ENST00000579553 63 ntBASIC1.62□□□□□ -2.15
SSBP1Q04837 MIR4429-201ENST00000580105 73 ntBASIC1.62□□□□□ -2.15
SSBP1Q04837 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SSBP1Q04837 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.62□□□□□ -2.15
SSBP1Q04837 AP001521.1-201ENST00000609150 300 ntBASIC1.62□□□□□ -2.15
SSBP1Q04837 MIR7106-201ENST00000612419 65 ntBASIC1.62□□□□□ -2.15
SSBP1Q04837 AC010378.1-201ENST00000619270 362 ntBASIC1.62□□□□□ -2.15
SSBP1Q04837 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SSBP1Q04837 AL359893.1-201ENST00000447628 1580 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SSBP1Q04837 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SSBP1Q04837 RNU1-91P-201ENST00000364746 163 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 MIR627-201ENST00000384979 97 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SSBP1Q04837 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 EIF1AXP1-201ENST00000419267 435 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 RPL23AP83-201ENST00000434984 473 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 IPO7P1-201ENST00000442031 636 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 HIGD1AP2-201ENST00000446367 280 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 TPT1P14-201ENST00000448018 505 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC108938.1-201ENST00000451204 136 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 MTCO3P11-201ENST00000455103 774 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.61□□□□□ -2.15
SSBP1Q04837 snoU13.3-201ENST00000459441 104 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AC021146.7-201ENST00000509604 775 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.61□□□□□ -2.15
SSBP1Q04837 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AP001646.1-201ENST00000527936 915 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AC093014.1-201ENST00000548926 724 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 GTF2IP8-201ENST00000560687 584 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC107954.1-201ENST00000565906 727 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AC090616.3-201ENST00000582184 217 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 GLUD1P4-201ENST00000590914 418 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 ZNF92P3-201ENST00000596594 954 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 U73023.1-201ENST00000603134 700 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
SSBP1Q04837 AC106028.5-201ENST00000610332 395 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 CR589904.2-201ENST00000612533 440 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AL731566.2-201ENST00000618971 317 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC018755.4-201ENST00000619715 454 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 AC092650.2-201ENST00000619984 902 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.61□□□□□ -2.15
SSBP1Q04837 MTND5P6-201ENST00000422338 1798 ntBASIC1.61□□□□□ -2.15
SSBP1Q04837 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.61□□□□□ -2.15
SSBP1Q04837 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SSBP1Q04837 AC099654.7-201ENST00000635788 2127 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AL137014.1-201ENST00000420490 1226 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.6□□□□□ -2.15
SSBP1Q04837 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.6□□□□□ -2.15
SSBP1Q04837 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.6□□□□□ -2.15
SSBP1Q04837 snoU13.4-201ENST00000458916 104 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 RNA5SP310-201ENST00000459084 116 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.6□□□□□ -2.15
SSBP1Q04837 AC107393.1-201ENST00000512403 346 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.6□□□□□ -2.15
SSBP1Q04837 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.6□□□□□ -2.15
SSBP1Q04837 RNU2-44P-201ENST00000516795 194 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.6□□□□□ -2.15
SSBP1Q04837 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.6□□□□□ -2.15
SSBP1Q04837 FAM60CP-201ENST00000591086 664 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AC008739.2-201ENST00000597006 317 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 KATNBL1P1-201ENST00000605192 748 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AC012557.1-201ENST00000607115 611 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AC009570.1-201ENST00000609599 745 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AC135507.2-201ENST00000612443 309 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 MIR203B-201ENST00000636080 86 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 AC011460.1-201ENST00000636268 1834 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SSBP1Q04837 AC022031.1-201ENST00000585985 2593 ntBASIC1.6□□□□□ -2.15
SSBP1Q04837 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
SSBP1Q04837 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SSBP1Q04837 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
SSBP1Q04837 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.59□□□□□ -2.15
SSBP1Q04837 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SSBP1Q04837 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SSBP1Q04837 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SSBP1Q04837 RNU6-263P-201ENST00000363811 107 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AL121972.1-201ENST00000402023 252 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AL356057.1-202ENST00000402263 756 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.59□□□□□ -2.15
SSBP1Q04837 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.59□□□□□ -2.15
SSBP1Q04837 MTCYBP12-201ENST00000440559 1134 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AC005002.1-201ENST00000447458 540 ntBASIC1.59□□□□□ -2.15
SSBP1Q04837 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.59□□□□□ -2.15
SSBP1Q04837 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.59□□□□□ -2.15
SSBP1Q04837 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms